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Analysis of Dynamic EPR Spectra of pH-Sensitive Nitroxides Using Machine Learning. / Davydov, D. R.; Antonov, D. O.; Kovaleva, E. G.
In: Applied Magnetic Resonance, Vol. 54, No. 6, 2023, p. 595-612.

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Davydov DR, Antonov DO, Kovaleva EG. Analysis of Dynamic EPR Spectra of pH-Sensitive Nitroxides Using Machine Learning. Applied Magnetic Resonance. 2023;54(6):595-612. doi: 10.1007/s00723-023-01531-0

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BibTeX

@article{def92ff27d6c454baaadda9adbe15125,
title = "Analysis of Dynamic EPR Spectra of pH-Sensitive Nitroxides Using Machine Learning",
abstract = "This research presents the application and comparison of the most popular machine learning algorithms (multilayer perceptron, ensemble of networks, convolutional neural network) to predict the shape of dynamic EPR signals of pH-sensitive nitroxide radicals (NR) with varying degrees of rotational correlation from EPR spectra obtained during the analysis of solid-phase systems. A training sample example consisting of theoretically modelled EPR spectra of pH-sensitive nitroxide radicals was prepared for the network learning. The result of applying and comparing machine learning algorithms with results obtained from simulations by the specialized software ODFR4 demonstrated that the multilayer perceptron and ensemble of networks have good accuracy in prediction signal shapes, however, within rather narrow scope of applicability. The convolutional neural network showed the worst results in predicting signal shapes. The results of this work can be useful for the development of software design to quickly estimate the parameters of analyzed systems by processing the EPR spectra of pH-sensitive nitroxide radicals. {\textcopyright} 2023, The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.",
author = "Davydov, {D. R.} and Antonov, {D. O.} and Kovaleva, {E. G.}",
note = "Текст о финансировании #1 The study was supported by a grant in the form of subsidy No. 075-15-2022-1251 dated 12/13/2022 between Ural Federal University and the Ministry of Science and Higher Education of the Russian Federation. Текст о финансировании #2 The study was supported by a grant in the form of subsidy No. 075–15-2022–1251 dated 12/13/2022 between Ural Federal University and the Ministry of Science and Higher Education of the Russian Federation.",
year = "2023",
doi = "10.1007/s00723-023-01531-0",
language = "English",
volume = "54",
pages = "595--612",
journal = "Applied Magnetic Resonance",
issn = "0937-9347",
publisher = "Springer-Verlag Wien",
number = "6",

}

RIS

TY - JOUR

T1 - Analysis of Dynamic EPR Spectra of pH-Sensitive Nitroxides Using Machine Learning

AU - Davydov, D. R.

AU - Antonov, D. O.

AU - Kovaleva, E. G.

N1 - Текст о финансировании #1 The study was supported by a grant in the form of subsidy No. 075-15-2022-1251 dated 12/13/2022 between Ural Federal University and the Ministry of Science and Higher Education of the Russian Federation. Текст о финансировании #2 The study was supported by a grant in the form of subsidy No. 075–15-2022–1251 dated 12/13/2022 between Ural Federal University and the Ministry of Science and Higher Education of the Russian Federation.

PY - 2023

Y1 - 2023

N2 - This research presents the application and comparison of the most popular machine learning algorithms (multilayer perceptron, ensemble of networks, convolutional neural network) to predict the shape of dynamic EPR signals of pH-sensitive nitroxide radicals (NR) with varying degrees of rotational correlation from EPR spectra obtained during the analysis of solid-phase systems. A training sample example consisting of theoretically modelled EPR spectra of pH-sensitive nitroxide radicals was prepared for the network learning. The result of applying and comparing machine learning algorithms with results obtained from simulations by the specialized software ODFR4 demonstrated that the multilayer perceptron and ensemble of networks have good accuracy in prediction signal shapes, however, within rather narrow scope of applicability. The convolutional neural network showed the worst results in predicting signal shapes. The results of this work can be useful for the development of software design to quickly estimate the parameters of analyzed systems by processing the EPR spectra of pH-sensitive nitroxide radicals. © 2023, The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

AB - This research presents the application and comparison of the most popular machine learning algorithms (multilayer perceptron, ensemble of networks, convolutional neural network) to predict the shape of dynamic EPR signals of pH-sensitive nitroxide radicals (NR) with varying degrees of rotational correlation from EPR spectra obtained during the analysis of solid-phase systems. A training sample example consisting of theoretically modelled EPR spectra of pH-sensitive nitroxide radicals was prepared for the network learning. The result of applying and comparing machine learning algorithms with results obtained from simulations by the specialized software ODFR4 demonstrated that the multilayer perceptron and ensemble of networks have good accuracy in prediction signal shapes, however, within rather narrow scope of applicability. The convolutional neural network showed the worst results in predicting signal shapes. The results of this work can be useful for the development of software design to quickly estimate the parameters of analyzed systems by processing the EPR spectra of pH-sensitive nitroxide radicals. © 2023, The Author(s), under exclusive licence to Springer-Verlag GmbH Austria, part of Springer Nature.

UR - http://www.scopus.com/inward/record.url?partnerID=8YFLogxK&scp=85150521786

UR - https://gateway.webofknowledge.com/gateway/Gateway.cgi?GWVersion=2&SrcAuth=tsmetrics&SrcApp=tsm_test&DestApp=WOS_CPL&DestLinkType=FullRecord&KeyUT=000954522400001

U2 - 10.1007/s00723-023-01531-0

DO - 10.1007/s00723-023-01531-0

M3 - Article

VL - 54

SP - 595

EP - 612

JO - Applied Magnetic Resonance

JF - Applied Magnetic Resonance

SN - 0937-9347

IS - 6

ER -

ID: 39192464